BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G04SP1|AL429793
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig737 1146 0.0
3x_Contig1660 254 2e-67
>3x_Contig737
Length = 2315
Score = 1146 bits (577), Expect = 0.0
Identities = 585/587 (99%), Gaps = 1/587 (0%)
Strand = Plus / Plus
Query: 1 gatcaacacttttgtcaaatggtaaaccaatggatcaaattctatagcgaacaactcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1729 gatcaacacttttgtcaaatggtaaaccaatggatcaaattctatagcgaacaactcatg 1788
Query: 61 acggacaaaattgaaatagtatgagacgatggatggaatcatacgggagaaaatgaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1789 acggacaaaattgaaatagtatgagacgatggatggaatcatacgggagaaaatgaacca 1848
Query: 121 gaaagagacggaaagaatgaaatccctttgacttggatagaaagtgacgaaatctggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1849 gaaagagacggaaagaatgaaatccctttgacttggatagaaagtgacgaaatctggaga 1908
Query: 181 tgggaaacggtaccagttgaattggatcaaagatttaacgaaaacgaacaattccacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1909 tgggaaacggtaccagttgaattggatcaaagatttaacgaaaacgaacaattccacagc 1968
Query: 241 caataccaactgtttcacagtgtgcaaagtagacaaataatcctgtacggtttcgttcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1969 caataccaactgtttcacagtgtgcaaagtagacaaataatcctgtacggtttcgttcca 2028
Query: 301 ttcctgagtggtccattggacgtcatcgacaaattcatggaatctgaagtagtaaggact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 ttcctgagtggtccattggacgtcatcgacaaattcatggaatctgaagtagtaaggact 2088
Query: 361 gtttgtgaccttgttgacgaatctcaaatttgaaaaccacagacaagctggggatttcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2089 gtttgtgaccttgttgacgaatctcaaatttgaaaaccacagacaagctggggatttcgt 2148
Query: 421 tggcaaatcagaacgatcaaacatttccttaatatcttgttcatcctcctcttcctcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2149 tggcaaatcagaacgatcaaacatttccttaatatcttgttcatcctcctcttcctcatc 2208
Query: 481 atctagagacgattcctcctcctcactatcttcttcatcattatcttctgctagcgcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2209 atctagagacgattcctcctcctcactatcttcttcatcattatcttctgctagcgcttc 2268
Query: 541 gtagtatagctgtwactctggatattc-gttcaaatcgacaggttca 586
||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 2269 gtagtatagctgtaactctggatattcggttcaaatcgacaggttca 2315
>3x_Contig1660
Length = 13166
Score = 254 bits (128), Expect = 2e-67
Identities = 128/128 (100%)
Strand = Plus / Minus
Query: 737 ggatgaggtgagttggctattaccaatattcagatagatagtttgtgtattcacatatac 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13166 ggatgaggtgagttggctattaccaatattcagatagatagtttgtgtattcacatatac 13107
Query: 797 atacaagtggtgcaagaatataacatttgatccaacgtctacacaaaaaaaaaaaaaata 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13106 atacaagtggtgcaagaatataacatttgatccaacgtctacacaaaaaaaaaaaaaata 13047
Query: 857 ctaataat 864
||||||||
Sbjct: 13046 ctaataat 13039
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,264
Number of Sequences: 1807
Number of extensions: 16264
Number of successful extensions: 414
Number of sequences better than 1.0e-20: 2
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)